Data Related Infomation

Camellia sinensis var. sinensis cv. Shuchazao                  CSS0018870.1                   AHAU CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   CSS0018870.1

KEGG Orthology

K10775  K13064  K01745  K20709  K13064   

Gene Family

Lyase_aromatic

Gene Attributes

Chromosome:Contig676
Cds Coordinates:164962-169028
Nucleotide length:4066
Prodicted protein length:711

Gene Ontology Classification

Database Annotation Match Start Match End GO
TIGRFAMphe_am_lyase: phenylalanine ammonia-lyase20701GO:0005737|GO:0006559|GO:0016841
ProSitePatternsPhenylalanine and histidine ammonia-lyases signature.193209GO:0016841
SUPERFAMILYL-aspartase-like20711GO:0003824

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR005922TIGRFAM20701Phenylalanine ammonia-lyase
IPR001106CDD56521Aromatic amino acid lyase
IPR001106Pfam58525Aromatic amino acid lyase
IPR023144Gene3D524638Phenylalanine ammonia-lyase, shielding domain superfamily
IPR024083Gene3D19257Fumarase/histidase, N-terminal
IPR022313ProSitePatterns193209Phenylalanine/histidine ammonia-lyases, active site
IPR001106PANTHER16711Aromatic amino acid lyase
IPR008948SUPERFAMILY20711L-Aspartase-like

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
KY61567199.81321360.0
XM_02825355699.62621390.0
MN20717699.39121350.0
JN94457898.80810910.0
MK33072698.1856610.0
MF54755998.1856610.0
MN83017598.1826600.0
MK33073098.0336610.0
MK33072898.0336610.0
MK33072598.0336610.0
MK33071798.0336610.0
MF54756298.0336610.0
MF54756198.0336610.0
MF54756098.0336610.0
MF54755198.0336610.0
MN83018098.036600.0
MN83017998.036600.0
MN83017798.036600.0
MN83017698.036600.0
MK33073597.8826610.0
MK33073497.8826610.0
MK33073397.8826610.0
MK33073297.8826610.0
MK33073197.8826610.0
MK33072997.8826610.0
MK33071697.8826610.0
MK33071597.8826610.0
MF54756397.8826610.0
MF54755797.8826610.0
MF54755597.8826610.0
MF54755297.8826610.0
MN83018297.8796600.0
MN83018197.8796600.0
MN83017897.8796600.0
MG38572198.1626530.0
KX75202898.1626530.0
KX75202798.1626530.0
MK33072497.7316610.0
MK33072297.7316610.0
MK33072197.7316610.0
MK33072097.7316610.0
MK33071997.7316610.0
MK33071897.7316610.0
MK33071497.7316610.0
MF54755897.7316610.0
MF54755697.7316610.0
MF54755497.7316610.0
MF54755397.7316610.0
MF54755097.7316610.0
MG38572098.0096530.0
MG38571998.0096530.0
MG38571898.0096530.0
KY44933198.0096530.0
KX75203698.0096530.0
KX75203598.0096530.0
KX75203398.0096530.0
KX75202998.0096530.0
KX75202698.0096530.0
KX75202498.0096530.0
KX75198898.0096530.0
KX75197498.0096530.0
KX75197298.0096530.0
KX75197098.0096530.0
KX75196998.0096530.0
KX75196698.0096530.0
MK33072797.5796610.0
MK33072397.5796610.0
MK33071397.5796610.0
MF54756497.5796610.0
MF54754997.5796610.0
MG38572597.8566530.0
MG38571597.8566530.0
KY44933297.8566530.0
KX75204897.8566530.0
KX75204797.8566530.0
KX752038986500.0
KX75203797.8566530.0
KX75203497.8566530.0
KX75203297.8566530.0
KX75202597.8566530.0
KX75201897.8566530.0
KX75197697.8566530.0
KX75197397.8566530.0
KX75196897.8566530.0
KX75196497.8566530.0
KX75196397.8566530.0
KX75196197.8566530.0
MF54756897.4286610.0
MF54756697.4286610.0
MF54756597.4286610.0
MG38572497.7036530.0
MG38572397.7036530.0
MG38572297.7036530.0
MG38571697.7036530.0
KX75204497.7036530.0
KX75204197.7036530.0
KX75203197.7036530.0
KX75202397.7036530.0
KX75202297.7036530.0
KX75202197.7036530.0
KX75202097.7036530.0
KX75201997.7036530.0
KX75201497.7036530.0
KX75198297.7036530.0
KX75197997.7036530.0
KX75197897.7036530.0
KX75197597.7036530.0
KX75196597.7036530.0
KX75196297.7036530.0
MF54756797.2776610.0
MG38571797.556530.0
KX75204297.556530.0
KX75204097.556530.0
KX75203997.556530.0
KX75203097.556530.0
KX75201597.556530.0
KX75201297.556530.0
KX75201197.556530.0
KX75200297.556530.0
KX75198797.556530.0
KX75198697.556530.0
KX75198497.556530.0
KX75198397.556530.0
KX75198197.556530.0
KX75198097.556530.0
KX75197797.556530.0
KX75197197.556530.0
KX75196797.556530.0
KX75204697.3976530.0
KX75204597.3976530.0
KX75204397.3976530.0
KX75201797.3976530.0
KX75201697.3976530.0
KX75201097.3976530.0
KX75200197.3976530.0
KX75199497.3976530.0
KX75198597.3976530.0
KX75201397.2436530.0
KX75200997.2436530.0
KX75200497.2436530.0
KX75199997.2436530.0
KX75199897.2436530.0
KX75199697.2436530.0
KX75199297.2436530.0
KX75200897.096530.0
KX75200797.096530.0
KX75200597.096530.0
KX75200397.096530.0
KX75200097.096530.0
KX75199797.096530.0
KX75199597.096530.0
KX75199397.096530.0
KX75199097.096530.0
KX75200696.9376530.0
KX75199196.9376530.0
KX75198996.9376530.0