Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR002403 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR002403 |
KEGG Orthology
Gene Family
GXGXG
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 130405554-130409593 |
| Nucleotide length: | 4039 |
| Prodicted protein length: | 185 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | GXGXG motif | 6 | 92 | GO:0016491 |
| SUPERFAMILY | Alpha subunit of glutamate synthase, C-terminal domain | 6 | 98 | GO:0016491 |
| Gene3D | - | 4 | 124 | GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR002489 | Pfam | 6 | 92 | Glutamate synthase, alpha subunit, C-terminal |
| IPR036485 | SUPERFAMILY | 6 | 98 | Glutamate synthase, alpha subunit, C-terminal domain superfamily |
| IPR036485 | Gene3D | 4 | 124 | Glutamate synthase, alpha subunit, C-terminal domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028256856 | 98.58 | 352 | 4.67e-173 |
| XM_028256856 | 97.248 | 218 | 2.42e-96 |
| XM_028256855 | 98.58 | 352 | 4.67e-173 |
| XM_028256855 | 97.248 | 218 | 2.42e-96 |
| XM_028256854 | 98.58 | 352 | 4.67e-173 |
| XM_028256854 | 97.248 | 218 | 2.42e-96 |