Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR022057 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR022057 |
KEGG Orthology
Gene Family
DIOX_N,2OG-FeII_Oxy
Gene Attributes
| Chromosome: | GWHAMJR00002849 |
| Cds Coordinates: | 17759992-17764163 |
| Nucleotide length: | 4171 |
| Prodicted protein length: | 335 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | 2OG-Fe(II) oxygenase superfamily | 196 | 231 | GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027443 | Gene3D | 232 | 323 | Isopenicillin N synthase-like |
| IPR026992 | Pfam | 39 | 149 | Non-haem dioxygenase N-terminal domain |
| IPR027443 | Gene3D | 6 | 231 | Isopenicillin N synthase-like |
| IPR005123 | Pfam | 196 | 231 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028251604 | 100 | 693 | 0.0 |
| XM_028251604 | 99.686 | 318 | 1.14e-161 |
| KY615688 | 99.856 | 693 | 0.0 |
| KY615688 | 99.057 | 318 | 2.46e-158 |
| AY641730 | 99.856 | 693 | 0.0 |
| AY641730 | 99.057 | 318 | 2.46e-158 |
| KY849375 | 99.278 | 693 | 0.0 |
| KY849375 | 99.057 | 318 | 2.46e-158 |
| HQ290517 | 99.278 | 693 | 0.0 |
| HQ290517 | 98.113 | 318 | 3.21e-152 |
| JN944581 | 96.537 | 693 | 0.0 |
| JN944581 | 98.428 | 318 | 5.33e-155 |
| AB524883 | 96.927 | 358 | 3.14e-167 |
| AB524883 | 97.207 | 179 | 9.92e-78 |