Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB009118 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB009118 |
Gene Family
2OG-FeII_Oxy,DIOX_N
Gene Attributes
| Chromosome: | GWHACFB00000014 |
| Cds Coordinates: | 49382117-49386775 |
| Nucleotide length: | 4658 |
| Prodicted protein length: | 362 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027443 | Gene3D | 5 | 353 | Isopenicillin N synthase-like |
| IPR005123 | Pfam | 214 | 310 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | ProSiteProfiles | 211 | 310 | Oxoglutarate/iron-dependent dioxygenase |
| IPR026992 | Pfam | 50 | 163 | Non-haem dioxygenase N-terminal domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MN266484 | 99.905 | 1051 | 0.0 |
| MN864231 | 99.905 | 1051 | 0.0 |
| KR902746 | 99.334 | 1051 | 0.0 |
| KY615704 | 98.953 | 1051 | 0.0 |
| JN944577 | 98.953 | 1051 | 0.0 |
| XM_028216924 | 100 | 983 | 0.0 |
| MG686525 | 98.634 | 805 | 0.0 |
| MG686530 | 98.385 | 805 | 0.0 |
| MG686526 | 98.385 | 805 | 0.0 |
| MG686531 | 98.137 | 805 | 0.0 |
| MG686527 | 98.137 | 805 | 0.0 |
| MG686532 | 97.888 | 805 | 0.0 |
| MG686528 | 97.888 | 805 | 0.0 |
| MG686529 | 97.764 | 805 | 0.0 |
| MG686533 | 97.64 | 805 | 0.0 |
| MG686534 | 97.391 | 805 | 0.0 |
| MG686535 | 97.267 | 805 | 0.0 |
| MG686536 | 97.019 | 805 | 0.0 |
| MG686537 | 96.894 | 805 | 0.0 |
| MG686538 | 96.77 | 805 | 0.0 |
| MG686539 | 96.522 | 805 | 0.0 |
| AB524886 | 98.932 | 468 | 0.0 |