Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB016169 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB016169 |
Gene Family
2OG-FeII_Oxy,DIOX_N
Gene Attributes
| Chromosome: | GWHACFB00000004 |
| Cds Coordinates: | 74432402-74437328 |
| Nucleotide length: | 4926 |
| Prodicted protein length: | 331 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027443 | Gene3D | 1 | 329 | Isopenicillin N synthase-like |
| IPR026992 | Pfam | 40 | 146 | Non-haem dioxygenase N-terminal domain |
| IPR005123 | Pfam | 199 | 290 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | ProSiteProfiles | 193 | 292 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028260716 | 100 | 996 | 0.0 |
| KY615705 | 99.598 | 996 | 0.0 |
| MH232961 | 99.398 | 996 | 0.0 |
| EF205150 | 99.398 | 996 | 0.0 |
| DQ198089 | 99.297 | 996 | 0.0 |
| MH232962 | 98.996 | 996 | 0.0 |
| MG720696 | 98.293 | 996 | 0.0 |
| MG720708 | 98.193 | 996 | 0.0 |
| MG720704 | 98.092 | 996 | 0.0 |
| MG720697 | 97.992 | 996 | 0.0 |
| MG720705 | 97.892 | 996 | 0.0 |
| MG720698 | 97.892 | 996 | 0.0 |
| MG720706 | 97.791 | 996 | 0.0 |
| MG720707 | 97.691 | 996 | 0.0 |
| MG720699 | 97.691 | 996 | 0.0 |
| MG720700 | 97.59 | 996 | 0.0 |
| MG720701 | 97.49 | 996 | 0.0 |
| MG720702 | 97.289 | 996 | 0.0 |
| MG720703 | 97.189 | 996 | 0.0 |
| XM_028226142 | 98.887 | 539 | 0.0 |
| XM_028248690 | 99.134 | 462 | 0.0 |
| XM_028248690 | 100 | 76 | 8.13e-29 |