Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB016172 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB016172 |
Gene Family
DIOX_N,2OG-FeII_Oxy
Gene Attributes
| Chromosome: | GWHACFB00000004 |
| Cds Coordinates: | 74719868-74728180 |
| Nucleotide length: | 8312 |
| Prodicted protein length: | 339 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027443 | Gene3D | 1 | 337 | Isopenicillin N synthase-like |
| IPR026992 | Pfam | 44 | 153 | Non-haem dioxygenase N-terminal domain |
| IPR005123 | Pfam | 204 | 299 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | ProSiteProfiles | 200 | 299 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KX254553 | 100 | 1020 | 0.0 |
| KY615707 | 99.902 | 1020 | 0.0 |
| XR_003633294 | 99.51 | 1020 | 0.0 |
| MG720710 | 99.118 | 1020 | 0.0 |
| MG720716 | 99.02 | 1020 | 0.0 |
| MG720720 | 98.922 | 1020 | 0.0 |
| MG720711 | 98.922 | 1020 | 0.0 |
| MG720717 | 98.824 | 1020 | 0.0 |
| MG720712 | 98.824 | 1020 | 0.0 |
| MG720718 | 98.725 | 1020 | 0.0 |
| MG720715 | 98.725 | 1020 | 0.0 |
| MG720713 | 98.627 | 1020 | 0.0 |
| MG720719 | 98.529 | 1020 | 0.0 |
| MG720714 | 98.529 | 1020 | 0.0 |
| MG720709 | 98.333 | 1020 | 0.0 |