Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB031209 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB031209 |
KEGG Orthology
Gene Family
2OG-FeII_Oxy,DIOX_N
Gene Attributes
| Chromosome: | GWHACFB00027397 |
| Cds Coordinates: | 39172-75178 |
| Nucleotide length: | 36006 |
| Prodicted protein length: | 675 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027443 | Gene3D | 340 | 673 | Isopenicillin N synthase-like |
| IPR027443 | Gene3D | 2 | 330 | Isopenicillin N synthase-like |
| IPR005123 | ProSiteProfiles | 537 | 636 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | Pfam | 199 | 295 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | Pfam | 541 | 636 | Oxoglutarate/iron-dependent dioxygenase |
| IPR026992 | Pfam | 41 | 148 | Non-haem dioxygenase N-terminal domain |
| IPR026992 | Pfam | 382 | 490 | Non-haem dioxygenase N-terminal domain |
| IPR005123 | ProSiteProfiles | 195 | 295 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| FJ577509 | 99.622 | 1059 | 0.0 |
| JF343560 | 98.68 | 1061 | 0.0 |
| XM_028197260 | 98.584 | 1059 | 0.0 |
| KY615706 | 98.417 | 1011 | 0.0 |
| XM_028197300 | 98.871 | 974 | 0.0 |
| XM_028197259 | 98.48 | 855 | 0.0 |
| XM_028197259 | 98.14 | 215 | 4.25e-99 |