Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB031287 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB031287 |
Gene Family
Epimerase,3Beta_HSD,GDP_Man_Dehyd,NAD_binding_4,NAD_binding_10,NmrA
Gene Attributes
| Chromosome: | GWHACFB00027454 |
| Cds Coordinates: | 37792-53037 |
| Nucleotide length: | 15245 |
| Prodicted protein length: | 276 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 8 | 244 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 3 | 270 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028200547 | 99.758 | 828 | 0.0 |
| MF977694 | 97.947 | 828 | 0.0 |
| KR873393 | 97.699 | 478 | 0.0 |
| XM_028250266 | 97.849 | 186 | 2.24e-83 |
| XM_028250266 | 97.076 | 171 | 2.27e-73 |
| XR_003631299 | 98.883 | 179 | 8.04e-83 |