Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB032407 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB032407 |
Gene Family
Epimerase,3Beta_HSD,NAD_binding_10,GDP_Man_Dehyd,NAD_binding_4,NmrA
Gene Attributes
| Chromosome: | GWHACFB00028617 |
| Cds Coordinates: | 29303-75451 |
| Nucleotide length: | 46148 |
| Prodicted protein length: | 164 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 8 | 136 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 3 | 158 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MF977694 | 95.833 | 480 | 0.0 |
| XR_003631299 | 99.441 | 179 | 9.96e-85 |
| XM_028250266 | 100 | 171 | 5.99e-82 |