Data Related Infomation
Camellia sinensis var. sinensis cv. Tieguanyin GWHPASIV010572 FAFU Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | Polyketide synthase, type III |
Locus Name: | GWHPASIV010572 |
KEGG Orthology
Gene Family
Chal_sti_synt_N
Gene Attributes
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
PIRSF | Polyketide synthase, type III | 16 | 397 | GO:0009058|GO:0016747 |
Gene3D | Thiolase-like | 7 | 247 | GO:0016746 |
SUPERFAMILY | Thiolase-like | 247 | 396 | GO:0016746 |
SUPERFAMILY | Thiolase-like | 27 | 240 | GO:0016746 |
PANTHER | Polyketide synthase, type III | 23 | 396 | GO:0009058|GO:0016747 |
Gene3D | Thiolase-like | 249 | 397 | GO:0016746 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Annotation | Match Start | Match End | E-value |
---|---|---|---|---|
PF00195 | Chalcone and stilbene synthases, N-terminal domain | 24 | 240 | 1e-5 |
PF02797 | Chalcone and stilbene synthases, C-terminal domain | 250 | 397 | 1e-5 |
Interpro hits
Interpro Accession | Database | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR011141 | PIRSF | 16 | 397 | PKS_III |
IPR016039 | Gene3D | 7 | 247 | - |
IPR016039 | SUPERFAMILY | 247 | 396 | Thiolase-like |
IPR016039 | SUPERFAMILY | 27 | 240 | Thiolase-like |
IPR011141 | PANTHER | 23 | 396 | HYDROXYMETHYLGLUTARYL-COA SYNTHASE |
- | CDD | 30 | 393 | CHS_like |
IPR001099 | Pfam | 24 | 240 | Chalcone and stilbene synthases, N-terminal domain |
IPR012328 | Pfam | 250 | 397 | Chalcone and stilbene synthases, C-terminal domain |
IPR016039 | Gene3D | 249 | 397 | - |
- | PANTHER | 23 | 396 | TYPE III POLYKETIDE SYNTHASE C |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
Null | Null | Null | Null |