Data Related Infomation

Camellia sinensis var. sinensis cv. Tieguanyin                  GWHPASIV010572                   FAFU Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Gene Identification

Gene Product Name:   Polyketide synthase, type III
Locus Name:   GWHPASIV010572

KEGG Orthology

K00660  K13233  K13232  K21385  K12644  K21384  K17211  K21386  K16167  K16233  K16231  K19580  K16424  K15431  K00648  K15397  K16232  K11608  K21378  K16872  K01641  K15311  K12723  

Gene Family

Chal_sti_synt_N

Gene Attributes

No Gene Attributes Found

Gene Ontology Classification

Database Annotation Match Start Match End GO
PIRSFPolyketide synthase, type III16397GO:0009058|GO:0016747
Gene3DThiolase-like7247GO:0016746
SUPERFAMILYThiolase-like247396GO:0016746
SUPERFAMILYThiolase-like27240GO:0016746
PANTHERPolyketide synthase, type III23396GO:0009058|GO:0016747
Gene3DThiolase-like249397GO:0016746

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Annotation Match Start Match End E-value
PF00195Chalcone and stilbene synthases, N-terminal domain242401e-5
PF02797Chalcone and stilbene synthases, C-terminal domain2503971e-5

Interpro hits

Interpro Accession Database Match Start Match End Annotation
IPR011141PIRSF16397PKS_III
IPR016039Gene3D7247-
IPR016039SUPERFAMILY247396Thiolase-like
IPR016039SUPERFAMILY27240Thiolase-like
IPR011141PANTHER23396HYDROXYMETHYLGLUTARYL-COA SYNTHASE
-CDD30393CHS_like
IPR001099Pfam24240Chalcone and stilbene synthases, N-terminal domain
IPR012328Pfam250397Chalcone and stilbene synthases, C-terminal domain
IPR016039Gene3D249397-
-PANTHER23396TYPE III POLYKETIDE SYNTHASE C

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
NullNullNullNull