Data Related Infomation
Camellia sinensis var. sinensis cv. Tieguanyin GWHPASIV020699 FAFU Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | Thiolase-like |
Locus Name: | GWHPASIV020699 |
KEGG Orthology
Gene Family
Chal_sti_synt_N
Gene Attributes
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
SUPERFAMILY | Thiolase-like | 192 | 343 | GO:0016746 |
Gene3D | Thiolase-like | 193 | 346 | GO:0016746 |
SUPERFAMILY | Thiolase-like | 18 | 188 | GO:0016746 |
PANTHER | Polyketide synthase, type III | 17 | 345 | GO:0009058|GO:0016747 |
PIRSF | Polyketide synthase, type III | 11 | 346 | GO:0009058|GO:0016747 |
Gene3D | Thiolase-like | 11 | 192 | GO:0016746 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Annotation | Match Start | Match End | E-value |
---|---|---|---|---|
PF00195 | Chalcone and stilbene synthases, N-terminal domain | 18 | 184 | 1e-5 |
PF02797 | Chalcone and stilbene synthases, C-terminal domain | 195 | 344 | 1e-5 |
Interpro hits
Interpro Accession | Database | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR001099 | Pfam | 18 | 184 | Chalcone and stilbene synthases, N-terminal domain |
- | PANTHER | 17 | 345 | CHALCONE SYNTHASE 2 |
- | CDD | 18 | 341 | CHS_like |
IPR016039 | SUPERFAMILY | 192 | 343 | Thiolase-like |
IPR016039 | Gene3D | 193 | 346 | - |
IPR016039 | SUPERFAMILY | 18 | 188 | Thiolase-like |
IPR012328 | Pfam | 195 | 344 | Chalcone and stilbene synthases, C-terminal domain |
IPR011141 | PANTHER | 17 | 345 | HYDROXYMETHYLGLUTARYL-COA SYNTHASE |
IPR011141 | PIRSF | 11 | 346 | PKS_III |
IPR016039 | Gene3D | 11 | 192 | - |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
Null | Null | Null | Null |