Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA016113.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA016113.1 |
KEGG Orthology
Gene Family
Chal_sti_synt_C
Gene Attributes
| Chromosome: | Sc0000277 |
| Cds Coordinates: | 469529-469762 |
| Nucleotide length: | 233 |
| Prodicted protein length: | 78 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR012328 | Pfam | 1 | 75 | Chalcone/stilbene synthase, C-terminal |
| IPR011141 | PANTHER | 2 | 76 | Polyketide synthase, type III |
| IPR016039 | SUPERFAMILY | 3 | 74 | Thiolase-like |
| IPR016039 | Gene3D | 1 | 77 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028237596 | 97.425 | 233 | 9.11e-107 |
| XM_028270488 | 95.726 | 234 | 1.19e-100 |
| AY146711 | 100 | 133 | 3.49e-61 |
| AY146699 | 100 | 133 | 3.49e-61 |
| AY146712 | 98.507 | 134 | 2.10e-58 |
| AY146700 | 98.485 | 132 | 2.72e-57 |
| AY146707 | 97.015 | 134 | 4.55e-55 |