Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA026709.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA026709.1 |
KEGG Orthology
Gene Family
Chal_sti_synt_N
Gene Attributes
| Chromosome: | xpSc0053310 |
| Cds Coordinates: | 117068-117297 |
| Nucleotide length: | 229 |
| Prodicted protein length: | 71 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001099 | Pfam | 5 | 69 | Chalcone/stilbene synthase, N-terminal |
| IPR016039 | SUPERFAMILY | 1 | 69 | Thiolase-like |
| IPR011141 | PANTHER | 2 | 69 | Polyketide synthase, type III |
| IPR016039 | Gene3D | 1 | 70 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028224715 | 97.059 | 204 | 1.08e-90 |
| MG720805 | 97.059 | 204 | 1.08e-90 |
| KY615682 | 97.059 | 204 | 1.08e-90 |
| D26594 | 97.059 | 204 | 1.08e-90 |
| MG720807 | 96.078 | 204 | 2.33e-87 |
| KC357708 | 96.078 | 204 | 2.33e-87 |
| MG720806 | 95.588 | 204 | 1.08e-85 |
| GU932717 | 95.652 | 46 | 5.61e-09 |