Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao TEA010588.1 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | TEA010588.1 |
Gene Family
Epimerase,GDP_Man_Dehyd,3Beta_HSD,NAD_binding_10,NAD_binding_4,KR,NmrA
Gene Attributes
| Chromosome: | chr9 |
| Cds Coordinates: | 189561778-189570389 |
| Nucleotide length: | 8611 |
| Prodicted protein length: | 465 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 23 | 274 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 23 | 274 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 363 | 458 | NAD(P)-binding domain superfamily |
| IPR036291 | SUPERFAMILY | 17 | 344 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028268820 | 99.709 | 1031 | 0.0 |
| XM_028268820 | 100 | 368 | 0.0 |
| XM_028268819 | 99.421 | 1037 | 0.0 |
| XM_028268819 | 99.185 | 368 | 0.0 |
| XM_028268818 | 99.135 | 1040 | 0.0 |
| XM_028268818 | 99.185 | 368 | 0.0 |
| XM_028268817 | 98.566 | 1046 | 0.0 |
| XM_028268817 | 99.185 | 368 | 0.0 |
| XM_028268816 | 98.566 | 1046 | 0.0 |
| XM_028268816 | 99.185 | 368 | 0.0 |
| KY615694 | 98.642 | 1031 | 0.0 |
| KY615694 | 100 | 368 | 0.0 |
| XM_028270404 | 97.379 | 1030 | 0.0 |
| XM_028270404 | 97.814 | 366 | 1.56e-176 |
| XR_003640464 | 97.32 | 485 | 0.0 |
| XR_003640464 | 98.37 | 368 | 0.0 |
| XM_028270424 | 95.694 | 418 | 0.0 |