Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao TEA015176.1 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | No Gene Product Found |
Locus Name: | TEA015176.1 |
Gene Family
Methyltransf_7
Gene Attributes
Chromosome: | chr3 |
Cds Coordinates: | 40164093-40184482 |
Nucleotide length: | 20389 |
Prodicted protein length: | 370 |
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
Pfam | SAM dependent carboxyl methyltransferase | 54 | 367 | GO:0008168 |
PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 6 | 364 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Name | Match Start | Match End | E-value |
---|---|---|---|---|
Null | Null | Null | Null | Null |
Interpro hits
Interpro Accession | Name | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR005299 | Pfam | 54 | 367 | SAM dependent carboxyl methyltransferase |
IPR042086 | Gene3D | 11 | 351 | Methyltransferase, alpha-helical capping domain |
IPR029063 | SUPERFAMILY | 5 | 367 | S-adenosyl-L-methionine-dependent methyltransferase |
IPR005299 | PANTHER | 6 | 364 | SAM dependent carboxyl methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
XM_028209955 | 99.461 | 1113 | 0.0 |
XM_028256070 | 95.5 | 1111 | 0.0 |
XM_028256069 | 95.12 | 1045 | 0.0 |
XM_028256069 | 96.341 | 82 | 4.24e-27 |
JX647694 | 98.263 | 403 | 0.0 |
JX647694 | 98.851 | 348 | 2.67e-173 |
JX647694 | 98.936 | 282 | 2.81e-138 |
JX647694 | 100 | 85 | 9.06e-34 |
JX647693 | 96.394 | 416 | 0.0 |
JX647693 | 95.69 | 348 | 5.91e-155 |
JX647693 | 96.441 | 281 | 4.77e-126 |
JX647693 | 96.341 | 82 | 4.24e-27 |
JX647695 | 95.035 | 282 | 6.21e-120 |
JX647695 | 96.203 | 79 | 1.97e-25 |
EF526217 | 96.377 | 276 | 2.87e-123 |
JX647690 | 96.377 | 276 | 2.87e-123 |
XM_028268333 | 98.649 | 148 | 1.87e-65 |
XM_028268338 | 98.387 | 124 | 4.10e-52 |
XM_028268336 | 98.387 | 124 | 4.10e-52 |
XM_028268335 | 98.387 | 124 | 4.10e-52 |
XM_028268334 | 98.058 | 103 | 1.93e-40 |
XM_028268332 | 98.058 | 103 | 1.93e-40 |
XM_028268331 | 98.058 | 103 | 1.93e-40 |