Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao TEA015198.1 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | TEA015198.1 |
KEGG Orthology
Gene Family
Gln-synt_C,Amidohydro_2,Gln-synt_N_2
Gene Attributes
| Chromosome: | chr1 |
| Cds Coordinates: | 208678532-208694984 |
| Nucleotide length: | 16452 |
| Prodicted protein length: | 848 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Glutamine synthetase N-terminal domain | 412 | 509 | GO:0004356|GO:0006542|GO:0006807 |
| Pfam | Glutamine synthetase, catalytic domain | 511 | 839 | GO:0004356|GO:0006807 |
| Pfam | Amidohydrolase | 226 | 386 | GO:0016787 |
| SUPERFAMILY | Glutamine synthetase/guanido kinase | 510 | 837 | GO:0003824 |
| SUPERFAMILY | Glutamine synthetase, N-terminal domain | 412 | 509 | GO:0004356|GO:0006542|GO:0006807 |
| SMART | Gln_synt_C_2 | 510 | 766 | GO:0004356|GO:0006807 |
| Gene3D | Glutamine synthetase | 411 | 506 | GO:0004356|GO:0006542|GO:0006807 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR008147 | Pfam | 412 | 509 | Glutamine synthetase, beta-Grasp domain |
| IPR032466 | SUPERFAMILY | 215 | 386 | Metal-dependent hydrolase |
| IPR008146 | Pfam | 511 | 839 | Glutamine synthetase, catalytic domain |
| IPR006680 | Pfam | 226 | 386 | Amidohydrolase-related |
| IPR014746 | SUPERFAMILY | 510 | 837 | Glutamine synthetase/guanido kinase, catalytic domain |
| IPR036651 | SUPERFAMILY | 412 | 509 | Glutamine synthetase, N-terminal domain superfamily |
| IPR008146 | SMART | 510 | 766 | Glutamine synthetase, catalytic domain |
| IPR036651 | Gene3D | 411 | 506 | Glutamine synthetase, N-terminal domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028195971 | 99.411 | 2547 | 0.0 |
| JQ925872 | 99.058 | 2547 | 0.0 |
| KY532105 | 99.779 | 453 | 0.0 |
| XM_028195579 | 99.404 | 503 | 0.0 |
| XM_028198325 | 97.908 | 478 | 0.0 |
| XM_028256178 | 99.052 | 422 | 0.0 |
| XR_003640946 | 96.009 | 426 | 0.0 |
| XR_003640945 | 96.009 | 426 | 0.0 |
| XR_003650626 | 96.658 | 389 | 1.03e-180 |
| XM_028219734 | 97.753 | 267 | 1.44e-124 |
| XR_003648000 | 97.872 | 235 | 1.90e-108 |
| XR_003647999 | 97.872 | 235 | 1.90e-108 |
| XR_003647998 | 97.872 | 235 | 1.90e-108 |
| XR_003647995 | 97.872 | 235 | 1.90e-108 |
| XR_003647994 | 97.872 | 235 | 1.90e-108 |
| XR_003647993 | 97.872 | 235 | 1.90e-108 |
| XR_003647992 | 97.872 | 235 | 1.90e-108 |
| XM_028262639 | 97.479 | 238 | 1.90e-108 |
| XM_028262638 | 97.479 | 238 | 1.90e-108 |
| XM_028262637 | 97.479 | 238 | 1.90e-108 |
| XR_003647996 | 97.854 | 233 | 2.46e-107 |
| XR_003647997 | 98.198 | 222 | 6.88e-103 |
| XM_028268023 | 95.745 | 235 | 4.14e-100 |
| XM_028198323 | 97.126 | 174 | 1.54e-74 |
| XM_028198322 | 97.126 | 174 | 1.54e-74 |
| XR_003632157 | 97.468 | 158 | 2.60e-67 |
| XM_028198324 | 98.684 | 76 | 9.89e-27 |
| XM_028266400 | 100 | 50 | 6.04e-14 |
| XR_003631023 | 96.364 | 55 | 2.17e-13 |
| XR_003642621 | 98.039 | 51 | 7.81e-13 |
| XR_003641104 | 98.039 | 51 | 7.81e-13 |
| XR_003631606 | 98.039 | 51 | 7.81e-13 |
| XR_003629527 | 98.039 | 51 | 7.81e-13 |
| XR_003648269 | 98.039 | 51 | 7.81e-13 |