Data Related Infomation

Camellia sinensis var. sinensis cv. Shuchazao                  TEA018665.1                   TRI CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   TEA018665.1

KEGG Orthology

K12644  K00660  K13231  K17212  K21385  K21386  K13232  K17211  K20503  K13234  K21384  K13233  

Gene Family

Chal_sti_synt_N,Chal_sti_synt_C,ACP_syn_III

Gene Attributes

Chromosome:chr10
Cds Coordinates:153465456-153466957
Nucleotide length:1501
Prodicted protein length:389

Gene Ontology Classification

Database Annotation Match Start Match End GO
Gene3D-1235GO:0016746
SUPERFAMILYThiolase-like236386GO:0016746
PIRSFPKS_III2388GO:0009058|GO:0016747
Gene3D-236388GO:0016746
SUPERFAMILYThiolase-like1231GO:0016746
ProSitePatternsChalcone and stilbene synthases active site.156172GO:0009058|GO:0016746
PANTHERHYDROXYMETHYLGLUTARYL-COA SYNTHASE2388GO:0009058|GO:0016747

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR016039Gene3D1235Thiolase-like
IPR016039SUPERFAMILY236386Thiolase-like
IPR011141PIRSF2388Polyketide synthase, type III
IPR016039Gene3D236388Thiolase-like
IPR016039SUPERFAMILY1231Thiolase-like
IPR012328Pfam238387Chalcone/stilbene synthase, C-terminal
IPR001099Pfam5228Chalcone/stilbene synthase, N-terminal
IPR018088ProSitePatterns156172Chalcone/stilbene synthase, active site
IPR011141PANTHER2388Polyketide synthase, type III

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_02826941410011700.0
KC35770696.6671801.50e-76
GU93271797.8572803.85e-132