Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao TEA022559.1 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | No Gene Product Found |
Locus Name: | TEA022559.1 |
Gene Family
Methyltransf_7
Gene Attributes
Chromosome: | chr3 |
Cds Coordinates: | 188730097-188732432 |
Nucleotide length: | 2335 |
Prodicted protein length: | 335 |
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 2 | 330 | GO:0008168 |
Pfam | SAM dependent carboxyl methyltransferase | 20 | 332 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Name | Match Start | Match End | E-value |
---|---|---|---|---|
Null | Null | Null | Null | Null |
Interpro hits
Interpro Accession | Name | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR005299 | PANTHER | 2 | 330 | SAM dependent carboxyl methyltransferase |
IPR029063 | SUPERFAMILY | 1 | 332 | S-adenosyl-L-methionine-dependent methyltransferase |
IPR042086 | Gene3D | 129 | 316 | Methyltransferase, alpha-helical capping domain |
IPR005299 | Pfam | 20 | 332 | SAM dependent carboxyl methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
XM_028256070 | 100 | 1008 | 0.0 |
XM_028256069 | 100 | 1008 | 0.0 |
XM_028209955 | 95.933 | 1008 | 0.0 |
JX647693 | 98.711 | 388 | 0.0 |
JX647693 | 100 | 350 | 0.0 |
JX647693 | 99.638 | 276 | 2.53e-138 |
JX647694 | 96.649 | 388 | 1.43e-180 |
JX647694 | 96.286 | 350 | 1.90e-159 |
JX647694 | 95.29 | 276 | 2.61e-118 |
EF526217 | 95.307 | 277 | 2.61e-118 |
JX647690 | 95.307 | 277 | 2.61e-118 |
XM_028268338 | 97.248 | 109 | 3.75e-42 |
XM_028268336 | 97.248 | 109 | 3.75e-42 |
XM_028268335 | 97.248 | 109 | 3.75e-42 |
XM_028268333 | 97.248 | 109 | 3.75e-42 |
XM_028268334 | 97.727 | 88 | 3.80e-32 |
XM_028268332 | 97.727 | 88 | 3.80e-32 |
XM_028268331 | 97.727 | 88 | 3.80e-32 |