Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao TEA024587.1 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | TEA024587.1 |
Gene Family
Lyase_aromatic
Gene Attributes
| Chromosome: | chr1 |
| Cds Coordinates: | 212825034-212829772 |
| Nucleotide length: | 4738 |
| Prodicted protein length: | 733 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 193 | 209 | GO:0016841 |
| TIGRFAM | phe_am_lyase: phenylalanine ammonia-lyase | 20 | 687 | GO:0005737|GO:0006559|GO:0016841 |
| SUPERFAMILY | L-aspartase-like | 20 | 683 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR023144 | Gene3D | 524 | 639 | Phenylalanine ammonia-lyase, shielding domain superfamily |
| IPR001106 | CDD | 56 | 521 | Aromatic amino acid lyase |
| IPR022313 | ProSitePatterns | 193 | 209 | Phenylalanine/histidine ammonia-lyases, active site |
| IPR024083 | Gene3D | 19 | 257 | Fumarase/histidase, N-terminal |
| IPR001106 | PANTHER | 16 | 686 | Aromatic amino acid lyase |
| IPR005922 | TIGRFAM | 20 | 687 | Phenylalanine ammonia-lyase |
| IPR008948 | SUPERFAMILY | 20 | 683 | L-Aspartase-like |
| IPR001106 | Pfam | 58 | 525 | Aromatic amino acid lyase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028253556 | 100 | 2049 | 0.0 |
| KY615671 | 99.707 | 2049 | 0.0 |
| MN207176 | 99.463 | 2049 | 0.0 |
| MN207176 | 95.031 | 161 | 2.92e-61 |
| JN944578 | 98.705 | 1004 | 0.0 |
| MK330726 | 98.336 | 661 | 0.0 |
| MF547559 | 98.336 | 661 | 0.0 |
| MN830175 | 98.333 | 660 | 0.0 |
| MK330730 | 98.185 | 661 | 0.0 |
| MK330728 | 98.185 | 661 | 0.0 |
| MK330725 | 98.185 | 661 | 0.0 |
| MK330717 | 98.185 | 661 | 0.0 |
| MF547562 | 98.185 | 661 | 0.0 |
| MF547561 | 98.185 | 661 | 0.0 |
| MF547560 | 98.185 | 661 | 0.0 |
| MF547551 | 98.185 | 661 | 0.0 |
| MN830180 | 98.182 | 660 | 0.0 |
| MN830179 | 98.182 | 660 | 0.0 |
| MN830177 | 98.182 | 660 | 0.0 |
| MN830176 | 98.182 | 660 | 0.0 |
| MK330735 | 98.033 | 661 | 0.0 |
| MK330734 | 98.033 | 661 | 0.0 |
| MK330733 | 98.033 | 661 | 0.0 |
| MK330732 | 98.033 | 661 | 0.0 |
| MK330731 | 98.033 | 661 | 0.0 |
| MK330729 | 98.033 | 661 | 0.0 |
| MK330716 | 98.033 | 661 | 0.0 |
| MK330715 | 98.033 | 661 | 0.0 |
| MF547563 | 98.033 | 661 | 0.0 |
| MF547557 | 98.033 | 661 | 0.0 |
| MF547555 | 98.033 | 661 | 0.0 |
| MF547552 | 98.033 | 661 | 0.0 |
| MN830182 | 98.03 | 660 | 0.0 |
| MN830181 | 98.03 | 660 | 0.0 |
| MN830178 | 98.03 | 660 | 0.0 |
| MG385721 | 98.315 | 653 | 0.0 |
| KX752028 | 98.315 | 653 | 0.0 |
| KX752027 | 98.315 | 653 | 0.0 |
| MK330724 | 97.882 | 661 | 0.0 |
| MK330722 | 97.882 | 661 | 0.0 |
| MK330721 | 97.882 | 661 | 0.0 |
| MK330720 | 97.882 | 661 | 0.0 |
| MK330719 | 97.882 | 661 | 0.0 |
| MK330718 | 97.882 | 661 | 0.0 |
| MK330714 | 97.882 | 661 | 0.0 |
| MF547558 | 97.882 | 661 | 0.0 |
| MF547556 | 97.882 | 661 | 0.0 |
| MF547554 | 97.882 | 661 | 0.0 |
| MF547553 | 97.882 | 661 | 0.0 |
| MF547550 | 97.882 | 661 | 0.0 |
| MG385720 | 98.162 | 653 | 0.0 |
| MG385719 | 98.162 | 653 | 0.0 |
| MG385718 | 98.162 | 653 | 0.0 |
| KY449331 | 98.162 | 653 | 0.0 |
| KX752036 | 98.162 | 653 | 0.0 |
| KX752035 | 98.162 | 653 | 0.0 |
| KX752033 | 98.162 | 653 | 0.0 |
| KX752029 | 98.162 | 653 | 0.0 |
| KX752026 | 98.162 | 653 | 0.0 |
| KX752024 | 98.162 | 653 | 0.0 |
| KX751988 | 98.162 | 653 | 0.0 |
| KX751974 | 98.162 | 653 | 0.0 |
| KX751972 | 98.162 | 653 | 0.0 |
| KX751970 | 98.162 | 653 | 0.0 |
| KX751969 | 98.162 | 653 | 0.0 |
| KX751966 | 98.162 | 653 | 0.0 |
| MK330727 | 97.731 | 661 | 0.0 |
| MK330723 | 97.731 | 661 | 0.0 |
| MK330713 | 97.731 | 661 | 0.0 |
| MF547564 | 97.731 | 661 | 0.0 |
| MF547549 | 97.731 | 661 | 0.0 |
| MG385725 | 98.009 | 653 | 0.0 |
| MG385715 | 98.009 | 653 | 0.0 |
| KY449332 | 98.009 | 653 | 0.0 |
| KX752048 | 98.009 | 653 | 0.0 |
| KX752047 | 98.009 | 653 | 0.0 |
| KX752038 | 98.154 | 650 | 0.0 |
| KX752037 | 98.009 | 653 | 0.0 |
| KX752034 | 98.009 | 653 | 0.0 |
| KX752032 | 98.009 | 653 | 0.0 |
| KX752025 | 98.009 | 653 | 0.0 |
| KX752018 | 98.009 | 653 | 0.0 |
| KX751976 | 98.009 | 653 | 0.0 |
| KX751973 | 98.009 | 653 | 0.0 |
| KX751968 | 98.009 | 653 | 0.0 |
| KX751964 | 98.009 | 653 | 0.0 |
| KX751963 | 98.009 | 653 | 0.0 |
| KX751961 | 98.009 | 653 | 0.0 |
| MF547568 | 97.579 | 661 | 0.0 |
| MF547566 | 97.579 | 661 | 0.0 |
| MF547565 | 97.579 | 661 | 0.0 |
| MG385724 | 97.856 | 653 | 0.0 |
| MG385723 | 97.856 | 653 | 0.0 |
| MG385722 | 97.856 | 653 | 0.0 |
| MG385716 | 97.856 | 653 | 0.0 |
| KX752044 | 97.856 | 653 | 0.0 |
| KX752041 | 97.856 | 653 | 0.0 |
| KX752031 | 97.856 | 653 | 0.0 |
| KX752023 | 97.856 | 653 | 0.0 |
| KX752022 | 97.856 | 653 | 0.0 |
| KX752021 | 97.856 | 653 | 0.0 |
| KX752020 | 97.856 | 653 | 0.0 |
| KX752019 | 97.856 | 653 | 0.0 |
| KX752014 | 97.856 | 653 | 0.0 |
| KX751982 | 97.856 | 653 | 0.0 |
| KX751979 | 97.856 | 653 | 0.0 |
| KX751978 | 97.856 | 653 | 0.0 |
| KX751975 | 97.856 | 653 | 0.0 |
| KX751965 | 97.856 | 653 | 0.0 |
| KX751962 | 97.856 | 653 | 0.0 |
| MF547567 | 97.428 | 661 | 0.0 |
| MG385717 | 97.703 | 653 | 0.0 |
| KX752042 | 97.703 | 653 | 0.0 |
| KX752040 | 97.703 | 653 | 0.0 |
| KX752039 | 97.703 | 653 | 0.0 |
| KX752030 | 97.703 | 653 | 0.0 |
| KX752015 | 97.703 | 653 | 0.0 |
| KX752012 | 97.703 | 653 | 0.0 |
| KX752011 | 97.703 | 653 | 0.0 |
| KX752002 | 97.703 | 653 | 0.0 |
| KX751987 | 97.703 | 653 | 0.0 |
| KX751986 | 97.703 | 653 | 0.0 |
| KX751984 | 97.703 | 653 | 0.0 |
| KX751983 | 97.703 | 653 | 0.0 |
| KX751981 | 97.703 | 653 | 0.0 |
| KX751980 | 97.703 | 653 | 0.0 |
| KX751977 | 97.703 | 653 | 0.0 |
| KX751971 | 97.703 | 653 | 0.0 |
| KX751967 | 97.703 | 653 | 0.0 |
| KX752046 | 97.55 | 653 | 0.0 |
| KX752045 | 97.55 | 653 | 0.0 |
| KX752043 | 97.55 | 653 | 0.0 |
| KX752017 | 97.55 | 653 | 0.0 |
| KX752016 | 97.55 | 653 | 0.0 |
| KX752010 | 97.55 | 653 | 0.0 |
| KX752001 | 97.55 | 653 | 0.0 |
| KX751994 | 97.55 | 653 | 0.0 |
| KX751985 | 97.55 | 653 | 0.0 |
| KX752013 | 97.397 | 653 | 0.0 |
| KX752009 | 97.397 | 653 | 0.0 |
| KX752004 | 97.397 | 653 | 0.0 |
| KX751999 | 97.397 | 653 | 0.0 |
| KX751998 | 97.397 | 653 | 0.0 |
| KX751996 | 97.397 | 653 | 0.0 |
| KX751992 | 97.397 | 653 | 0.0 |
| KX752008 | 97.243 | 653 | 0.0 |
| KX752007 | 97.243 | 653 | 0.0 |
| KX752005 | 97.243 | 653 | 0.0 |
| KX752003 | 97.243 | 653 | 0.0 |
| KX752000 | 97.243 | 653 | 0.0 |
| KX751997 | 97.243 | 653 | 0.0 |
| KX751995 | 97.243 | 653 | 0.0 |
| KX751993 | 97.243 | 653 | 0.0 |
| KX751990 | 97.243 | 653 | 0.0 |
| KX752006 | 97.09 | 653 | 0.0 |
| KX751991 | 97.09 | 653 | 0.0 |
| KX751989 | 97.09 | 653 | 0.0 |