Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao TEA024762.1 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | TEA024762.1 |
Gene Family
Epimerase,3Beta_HSD,NAD_binding_4,NAD_binding_10,GDP_Man_Dehyd,NmrA,Polysacc_synt_2
Gene Attributes
| Chromosome: | chr1 |
| Cds Coordinates: | 15776746-15784181 |
| Nucleotide length: | 7435 |
| Prodicted protein length: | 493 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 13 | 205 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 13 | 205 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 9 | 214 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028243764 | 100 | 664 | 0.0 |
| XM_028243764 | 100 | 134 | 7.02e-61 |
| KY615693 | 99.546 | 661 | 0.0 |
| KY615693 | 100 | 134 | 7.02e-61 |
| XM_028243766 | 100 | 183 | 4.05e-88 |