Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao TEA027829.1 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | TEA027829.1 |
KEGG Orthology
K16094 K23665 K16099 K16131 K24101 K15655 K15653 K15668 K16095 K15675 K15394 K15662 K22148 K19102 K02364 K16129 K16130 K12743 K16121 K15659 K16391 K16378 K16416 K00155 K15018 K16229 K16098 K23667 K03822 K12425 K16126 K22152 K16375 K12709 K16430 K14469 K16101 K10526 K01904 K01897 K01043 K19103 K15663 K04788 K15658 K16122 K12421 K04792 K12240 K13611 K04784 K15664 K04789 K15661 K15656 K18000 K16124 K12239 K22739 K16123 K16120 K16093 K21059 K15660 K15666 K15384 K00666 K15667 K15665 K15654 K04780 K15670 K16432 K21792 K16228 K12237 K22118 K16119 K16428 K12701 K15395 K12444 K12442
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | chr15 |
| Cds Coordinates: | 94895910-94903790 |
| Nucleotide length: | 7880 |
| Prodicted protein length: | 437 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR020845 | ProSitePatterns | 81 | 92 | AMP-binding, conserved site |
| IPR025110 | Pfam | 346 | 421 | AMP-binding enzyme, C-terminal domain |
| IPR042099 | Gene3D | 1 | 331 | AMP-dependent synthetase-like superfamily |
| IPR000873 | Pfam | 2 | 337 | AMP-dependent synthetase/ligase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028215194 | 100 | 1314 | 0.0 |
| KY615678 | 99.391 | 1314 | 0.0 |
| XM_028251405 | 98.039 | 357 | 3.17e-173 |