Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao TEA034001.1 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | TEA034001.1 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | chr1 |
| Cds Coordinates: | 165422778-165439849 |
| Nucleotide length: | 17071 |
| Prodicted protein length: | 504 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Cytochrome P450 | 34 | 502 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 358 | 369 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 305 | 322 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 437 | 446 | GO:0005506|GO:0016705|GO:0020037 |
| Gene3D | Cytochrome p450 | 24 | 500 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 439 | 448 | GO:0016705 |
| PRINTS | E-class P450 group I signature | 398 | 422 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 62 | 81 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 180 | 198 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 357 | 375 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 294 | 311 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 446 | 469 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 86 | 107 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 436 | 446 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 314 | 340 | GO:0005506|GO:0016705|GO:0020037 |
| Pfam | Cytochrome P450 | 34 | 494 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036396 | SUPERFAMILY | 34 | 502 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 358 | 369 | Cytochrome P450 |
| IPR001128 | PRINTS | 305 | 322 | Cytochrome P450 |
| IPR001128 | PRINTS | 437 | 446 | Cytochrome P450 |
| IPR036396 | Gene3D | 24 | 500 | Cytochrome P450 superfamily |
| IPR017972 | ProSitePatterns | 439 | 448 | Cytochrome P450, conserved site |
| IPR002401 | PRINTS | 398 | 422 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 62 | 81 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 180 | 198 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 357 | 375 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 294 | 311 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 446 | 469 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 86 | 107 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 436 | 446 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 314 | 340 | Cytochrome P450, E-class, group I |
| IPR001128 | Pfam | 34 | 494 | Cytochrome P450 |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028200844 | 99.802 | 1515 | 0.0 |
| KY615676 | 99.472 | 1515 | 0.0 |
| KC357588 | 98.68 | 1515 | 0.0 |