Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0001751.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0001751.1 |
KEGG Orthology
No KEGG Orthology Found
Gene Family
Chal_sti_synt_C
Gene Attributes
| Chromosome: | Chr8 |
| Cds Coordinates: | 139115000-139115586 |
| Nucleotide length: | 586 |
| Prodicted protein length: | 134 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Gene3D | - | 69 | 121 | GO:0016746 |
| Gene3D | - | 4 | 68 | GO:0016746 |
| PANTHER | HYDROXYMETHYLGLUTARYL-COA SYNTHASE | 16 | 120 | GO:0009058|GO:0016747 |
| SUPERFAMILY | Thiolase-like | 11 | 120 | GO:0016746 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR012328 | Pfam | 16 | 120 | Chalcone/stilbene synthase, C-terminal |
| IPR016039 | Gene3D | 69 | 121 | Thiolase-like |
| IPR016039 | Gene3D | 4 | 68 | Thiolase-like |
| IPR011141 | PANTHER | 16 | 120 | Polyketide synthase, type III |
| IPR016039 | SUPERFAMILY | 11 | 120 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| Null | Null | Null | Null |