Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0003013.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0003013.1 |
KEGG Orthology
K16095 K15384 K15394 K15660 K16428 K16391 K12444 K15665 K15675 K16124 K16093 K15659 K16129 K22148 K02364 K15395 K16228 K16126 K16121 K16122 K04792 K22118 K18000 K04784 K15658 K23665 K12425 K01043 K21792 K12442 K16229 K16432 K15018 K16123 K16130 K14469 K10526 K01904 K01897 K16430 K16099 K15668 K15654 K15662 K13611 K15663 K12240 K24101 K12239 K16131 K15664 K12709 K04789 K15667 K12237 K15653 K15666 K16101 K15655 K00155 K16094 K04788 K12421 K21059 K16416 K00666 K16375 K15661 K15656 K04780 K15670 K12743 K22152 K16098 K16119 K19103 K19102 K16120 K16378 K03822 K12701 K23667
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | Chr7 |
| Cds Coordinates: | 184993999-185000809 |
| Nucleotide length: | 6810 |
| Prodicted protein length: | 556 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR000873 | Pfam | 53 | 453 | AMP-dependent synthetase/ligase |
| IPR025110 | Pfam | 462 | 537 | AMP-binding enzyme, C-terminal domain |
| IPR042099 | Gene3D | 23 | 447 | AMP-dependent synthetase-like superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028196719 | 100 | 1047 | 0.0 |
| XM_028196719 | 99.84 | 625 | 0.0 |
| KY615679 | 99.809 | 1047 | 0.0 |
| KY615679 | 99.84 | 625 | 0.0 |
| DQ194356 | 98.668 | 1051 | 0.0 |
| DQ194356 | 97.444 | 626 | 0.0 |
| XR_003645807 | 100 | 181 | 5.92e-87 |