Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0003998.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0003998.1 |
KEGG Orthology
K07408 K17719 K01773 K15472 K20623 K15814 K13083 K00495 K23814 K13389 K13225 K17709 K17683 K24188 K13401 K20556 K07433 K23805 K16084 K13226 K17718 K11812 K21693 K23179 K13267 K24179 K23810 K20556 K22983 K20544 K17721 K09754 K20562 K11813 K20496 K13029 K20618 K23807 K13260 K09755 K22691 K22636 K13404 K20564 K20662 K13261 K23806 K21718 K24187 K15089 K22637 K15805 K13385 K12640 K15099 K05280 K22638 K22635 K20617 K20513 K17729 K17728 K17689 K17690 K17691 K17730 K17651
Gene Family
p450
Gene Attributes
| Chromosome: | Chr3 |
| Cds Coordinates: | 163516436-163519058 |
| Nucleotide length: | 2622 |
| Prodicted protein length: | 495 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Gene3D | Cytochrome p450 | 16 | 491 | GO:0005506|GO:0016705|GO:0020037 |
| SUPERFAMILY | Cytochrome P450 | 27 | 491 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 352 | 363 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 299 | 316 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 429 | 438 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | GO:0016705 |
| Pfam | Cytochrome P450 | 31 | 480 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 351 | 369 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 58 | 77 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 308 | 334 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 438 | 461 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 288 | 305 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 82 | 103 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 392 | 416 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 428 | 438 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
SP(Sec/SPI)
CS pos:24-25.
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036396 | Gene3D | 16 | 491 | Cytochrome P450 superfamily |
| IPR036396 | SUPERFAMILY | 27 | 491 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 352 | 363 | Cytochrome P450 |
| IPR001128 | PRINTS | 299 | 316 | Cytochrome P450 |
| IPR001128 | PRINTS | 429 | 438 | Cytochrome P450 |
| IPR017972 | ProSitePatterns | 431 | 440 | Cytochrome P450, conserved site |
| IPR001128 | Pfam | 31 | 480 | Cytochrome P450 |
| IPR002401 | PRINTS | 351 | 369 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 58 | 77 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 308 | 334 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 438 | 461 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 288 | 305 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 82 | 103 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 392 | 416 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 428 | 438 | Cytochrome P450, E-class, group I |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028208856 | 100 | 1488 | 0.0 |
| XM_028208865 | 97.119 | 590 | 0.0 |
| XM_028208864 | 95.866 | 387 | 1.00e-173 |