Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0004017.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0004017.1 |
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | Contig1219 |
| Cds Coordinates: | 174111-177371 |
| Nucleotide length: | 3260 |
| Prodicted protein length: | 411 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | SAM dependent carboxyl methyltransferase | 86 | 409 | GO:0008168 |
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 49 | 408 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR042086 | Gene3D | 53 | 394 | Methyltransferase, alpha-helical capping domain |
| IPR005299 | Pfam | 86 | 409 | SAM dependent carboxyl methyltransferase |
| IPR029063 | SUPERFAMILY | 48 | 411 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR005299 | PANTHER | 49 | 408 | SAM dependent carboxyl methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028261461 | 99.919 | 1230 | 0.0 |
| XM_028261147 | 100 | 868 | 0.0 |