Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0010082.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0010082.1 |
KEGG Orthology
K16428 K15653 K16432 K12701 K15663 K15661 K22148 K15655 K15660 K16123 K15666 K16095 K16122 K16416 K15665 K00155 K19102 K22739 K12239 K15384 K15662 K12709 K16131 K01043 K15395 K22152 K16120 K12444 K16121 K16129 K12743 K03822 K23665 K04788 K16391 K12425 K21792 K12240 K10526 K01904 K01897 K15658 K16378 K24101 K02364 K18000 K12421 K04784 K15668 K16375 K15394 K16094 K04789 K15667 K15654 K15656 K16229 K13611 K16124 K22118 K15664 K16228 K15659 K21059 K15018 K04792 K16430 K00666 K04780 K15670 K02182 K18661 K18687 K12442 K23667 K19103 K16126 K16119 K15675 K12237 K16099 K16130 K01904 K16101 K14469 K16093 K16098
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | Chr13 |
| Cds Coordinates: | 67029778-67040246 |
| Nucleotide length: | 10468 |
| Prodicted protein length: | 544 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR020845 | ProSitePatterns | 195 | 206 | AMP-binding, conserved site |
| IPR042099 | Gene3D | 10 | 441 | AMP-dependent synthetase-like superfamily |
| IPR000873 | Pfam | 35 | 446 | AMP-dependent synthetase/ligase |
| IPR025110 | Pfam | 455 | 530 | AMP-binding enzyme, C-terminal domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028249324 | 99.817 | 1635 | 0.0 |
| MH981229 | 99.633 | 1635 | 0.0 |