Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0011741.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0011741.1 |
KEGG Orthology
K15394 K16098 K16099 K24101 K15018 K15661 K16122 K04788 K16094 K12239 K15653 K16095 K16416 K16119 K21059 K15659 K16229 K14469 K03822 K01043 K15675 K02364 K16131 K15395 K19103 K15662 K12442 K12425 K22118 K15658 K16126 K18000 K12237 K04792 K16375 K15384 K22739 K21792 K10526 K01904 K01897 K22148 K16120 K15666 K15655 K00155 K12709 K16391 K12240 K16123 K13611 K15663 K04789 K15665 K15656 K15667 K12701 K12421 K16124 K16432 K15668 K16378 K16093 K15664 K15660 K04784 K12743 K00666 K15654 K04780 K15670 K02182 K18687 K23665 K16130 K16228 K19102 K16430 K12444 K16129 K22152 K16121 K01904 K16101 K16428 K23667
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | Chr15 |
| Cds Coordinates: | 39702929-39711675 |
| Nucleotide length: | 8746 |
| Prodicted protein length: | 542 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR025110 | Pfam | 451 | 526 | AMP-binding enzyme, C-terminal domain |
| IPR000873 | Pfam | 33 | 442 | AMP-dependent synthetase/ligase |
| IPR042099 | Gene3D | 1 | 436 | AMP-dependent synthetase-like superfamily |
| IPR020845 | ProSitePatterns | 186 | 197 | AMP-binding, conserved site |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615678 | 99.693 | 1629 | 0.0 |
| XM_028215194 | 99.635 | 1369 | 0.0 |
| XM_028215194 | 99.522 | 209 | 2.63e-100 |
| XM_028251405 | 98.202 | 445 | 0.0 |
| XM_028251405 | 95.279 | 233 | 5.69e-97 |