Data Related Infomation

Camellia sinensis var. sinensis cv. Shuchazao                  CSS0015529.1                   AHAU CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   CSS0015529.1

KEGG Orthology

K01859   

Gene Family

Chalcone

Gene Attributes

Chromosome:Chr11
Cds Coordinates:60211140-60212283
Nucleotide length:1143
Prodicted protein length:89

Gene Ontology Classification

Database Annotation Match Start Match End GO
SUPERFAMILYChalcone isomerase285GO:0016872
PfamChalcone-flavanone isomerase374GO:0016872

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR016088Gene3D187Chalcone isomerase, 3-layer sandwich
IPR036298SUPERFAMILY285Chalcone isomerase superfamily
IPR044191PANTHER281Chalcone--flavonone isomerase 3-like
IPR016087Pfam374Chalcone isomerase

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_0282704261002702.86e-137
MG72078498.3472424.93e-115
MG72078398.3472424.93e-115
MG72078298.3472424.93e-115
MG72077998.3472424.93e-115
MG72077798.3472424.93e-115
MG72077698.3472424.93e-115
XM_02821444097.9342422.29e-113
MG72078597.9342422.29e-113
MG72078197.9342422.29e-113
MG72078097.9342422.29e-113
MG72077897.9342422.29e-113
KY61568697.9342422.29e-113
XM_02823260399.3291492.44e-68