Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0016246.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0016246.1 |
KEGG Orthology
K16094 K16130 K16099 K16095 K16093 K15665 K16122 K15664 K24101 K12709 K15663 K16131 K22148 K19103 K04788 K15659 K16229 K21792 K12237 K19102 K22118 K02364 K15653 K16120 K15662 K12421 K03822 K12442 K01043 K18000 K16129 K12743 K15384 K16375 K15668 K16416 K22739 K16098 K10526 K01904 K01897 K15018 K15395 K12240 K15661 K00155 K15666 K16123 K04792 K04784 K13611 K16391 K15656 K15667 K15654 K04780 K12701 K12239 K16124 K12425 K15655 K15675 K15660 K04789 K15394 K21059 K16430 K00666 K15670 K02182 K18661 K04116 K18687 K16228 K23665 K23667 K16121 K12444 K16428 K16126 K16119 K16378 K14469 K16101 K16432 K01904 K22152 K15658
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | Chr2 |
| Cds Coordinates: | 197082620-197091770 |
| Nucleotide length: | 9150 |
| Prodicted protein length: | 543 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR025110 | Pfam | 452 | 527 | AMP-binding enzyme, C-terminal domain |
| IPR042099 | Gene3D | 1 | 437 | AMP-dependent synthetase-like superfamily |
| IPR020845 | ProSitePatterns | 187 | 198 | AMP-binding, conserved site |
| IPR000873 | Pfam | 33 | 443 | AMP-dependent synthetase/ligase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615680 | 99.939 | 1632 | 0.0 |
| XM_028222930 | 99.877 | 1632 | 0.0 |