Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0016543.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0016543.1 |
Gene Family
Epimerase,3Beta_HSD,GDP_Man_Dehyd,NAD_binding_10,NAD_binding_4,NmrA
Gene Attributes
| Chromosome: | Chr4 |
| Cds Coordinates: | 12200867-12205174 |
| Nucleotide length: | 4307 |
| Prodicted protein length: | 344 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 18 | 259 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036291 | SUPERFAMILY | 15 | 321 | NAD(P)-binding domain superfamily |
| IPR001509 | Pfam | 18 | 259 | NAD-dependent epimerase/dehydratase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028251603 | 99.807 | 1035 | 0.0 |
| KY615691 | 99.614 | 1035 | 0.0 |