Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0018498.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0018498.1 |
Gene Family
DIOX_N,2OG-FeII_Oxy
Gene Attributes
| Chromosome: | Chr3 |
| Cds Coordinates: | 25946119-25947865 |
| Nucleotide length: | 1746 |
| Prodicted protein length: | 298 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 174 | 264 | GO:0016491 |
| Pfam | 2OG-Fe(II) oxygenase superfamily | 178 | 261 | GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR005123 | ProSiteProfiles | 174 | 264 | Oxoglutarate/iron-dependent dioxygenase |
| IPR026992 | Pfam | 32 | 79 | Non-haem dioxygenase N-terminal domain |
| IPR005123 | Pfam | 178 | 261 | Oxoglutarate/iron-dependent dioxygenase |
| IPR027443 | Gene3D | 5 | 298 | Isopenicillin N synthase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028216924 | 96.994 | 499 | 0.0 |
| XM_028216924 | 97.765 | 179 | 2.44e-78 |
| XM_028216924 | 96.748 | 123 | 3.30e-47 |
| XM_028216924 | 100 | 68 | 2.04e-24 |
| MN266484 | 96.794 | 499 | 0.0 |
| MN266484 | 97.765 | 179 | 2.44e-78 |
| MN266484 | 97.093 | 172 | 8.85e-73 |
| MN266484 | 100 | 68 | 2.04e-24 |
| MN864231 | 96.794 | 499 | 0.0 |
| MN864231 | 97.765 | 179 | 2.44e-78 |
| MN864231 | 97.093 | 172 | 8.85e-73 |
| MN864231 | 100 | 68 | 2.04e-24 |
| KR902746 | 96.393 | 499 | 0.0 |
| KR902746 | 97.765 | 179 | 2.44e-78 |
| KR902746 | 97.024 | 168 | 1.48e-70 |
| KR902746 | 98.529 | 68 | 9.50e-23 |
| KY615704 | 95.783 | 498 | 0.0 |
| KY615704 | 97.207 | 179 | 1.14e-76 |
| KY615704 | 96.512 | 172 | 4.12e-71 |
| KY615704 | 100 | 68 | 2.04e-24 |
| JN944577 | 95.783 | 498 | 0.0 |
| JN944577 | 97.207 | 179 | 1.14e-76 |
| JN944577 | 96.512 | 172 | 4.12e-71 |
| JN944577 | 100 | 68 | 2.04e-24 |
| MG686534 | 95.582 | 498 | 0.0 |
| MG686534 | 96.154 | 52 | 3.47e-12 |
| MG686533 | 95.582 | 498 | 0.0 |
| MG686533 | 96.154 | 52 | 3.47e-12 |
| MG686532 | 95.582 | 498 | 0.0 |
| MG686532 | 96.154 | 52 | 3.47e-12 |
| MG686531 | 95.582 | 498 | 0.0 |
| MG686531 | 96.154 | 52 | 3.47e-12 |
| MG686530 | 95.582 | 498 | 0.0 |
| MG686530 | 95.93 | 172 | 1.92e-69 |
| MG686530 | 96.154 | 52 | 3.47e-12 |
| MG686529 | 95.582 | 498 | 0.0 |
| MG686529 | 95.833 | 168 | 3.21e-67 |
| MG686528 | 95.582 | 498 | 0.0 |
| MG686528 | 95.833 | 168 | 3.21e-67 |
| MG686527 | 95.582 | 498 | 0.0 |
| MG686527 | 96.429 | 168 | 6.89e-69 |
| MG686526 | 95.582 | 498 | 0.0 |
| MG686526 | 96.512 | 172 | 4.12e-71 |
| MG686525 | 95.582 | 498 | 0.0 |
| MG686525 | 96.512 | 172 | 4.12e-71 |
| MG686525 | 96.154 | 52 | 3.47e-12 |
| MG686535 | 95.382 | 498 | 0.0 |
| MG686535 | 96.154 | 52 | 3.47e-12 |
| MG686536 | 95.181 | 498 | 0.0 |
| MG686536 | 96.154 | 52 | 3.47e-12 |
| MG686539 | 96.154 | 52 | 3.47e-12 |
| MG686538 | 96.154 | 52 | 3.47e-12 |
| MG686537 | 96.154 | 52 | 3.47e-12 |
| AB524886 | 95.116 | 389 | 1.00e-166 |
| AB524886 | 95.833 | 48 | 2.09e-09 |