Data Related Infomation

Camellia sinensis var. sinensis cv. Shuchazao                  CSS0021474.1                   AHAU CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   CSS0021474.1

KEGG Orthology

K10775  K13064  K01745  K20709  K13064   

Gene Family

Lyase_aromatic

Gene Attributes

Chromosome:Chr4
Cds Coordinates:169480393-169484431
Nucleotide length:4038
Prodicted protein length:711

Gene Ontology Classification

Database Annotation Match Start Match End GO
ProSitePatternsPhenylalanine and histidine ammonia-lyases signature.193209GO:0016841
SUPERFAMILYL-aspartase-like20711GO:0003824
TIGRFAMphe_am_lyase: phenylalanine ammonia-lyase20701GO:0005737|GO:0006559|GO:0016841

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR022313ProSitePatterns193209Phenylalanine/histidine ammonia-lyases, active site
IPR001106CDD56521Aromatic amino acid lyase
IPR023144Gene3D524638Phenylalanine ammonia-lyase, shielding domain superfamily
IPR024083Gene3D19257Fumarase/histidase, N-terminal
IPR001106PANTHER16711Aromatic amino acid lyase
IPR008948SUPERFAMILY20711L-Aspartase-like
IPR001106Pfam58525Aromatic amino acid lyase
IPR005922TIGRFAM20701Phenylalanine ammonia-lyase

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
MN20717699.85921350.0
XM_02825355699.53221390.0
KY61567199.34521360.0
JN94457899.08310910.0
MK33072697.8826610.0
MF54755997.8826610.0
MN83017597.8796600.0
MK33073097.7316610.0
MK33072897.7316610.0
MK33072597.7316610.0
MK33071797.7316610.0
MF54756297.7316610.0
MF54756197.7316610.0
MF54756097.7316610.0
MF54755197.7316610.0
MN83018097.7276600.0
MN83017997.7276600.0
MN83017797.7276600.0
MN83017697.7276600.0
MG38572098.0096530.0
MK33073597.5796610.0
MK33073497.5796610.0
MK33073397.5796610.0
MK33073297.5796610.0
MK33073197.5796610.0
MK33072997.5796610.0
MK33071697.5796610.0
MK33071597.5796610.0
MF54756397.5796610.0
MF54755797.5796610.0
MF54755597.5796610.0
MF54755297.5796610.0
MN83018297.5766600.0
MN83018197.5766600.0
MN83017897.5766600.0
MG38572197.8566530.0
KX75202897.8566530.0
KX75202797.8566530.0
MK33072497.4286610.0
MK33072297.4286610.0
MK33072197.4286610.0
MK33072097.4286610.0
MK33071997.4286610.0
MK33071897.4286610.0
MK33071497.4286610.0
MF54755897.4286610.0
MF54755697.4286610.0
MF54755497.4286610.0
MF54755397.4286610.0
MF54755097.4286610.0
MG38571997.7036530.0
MG38571897.7036530.0
KY44933197.7036530.0
KX75203697.7036530.0
KX75203597.7036530.0
KX75203397.7036530.0
KX75202997.7036530.0
KX75202697.7036530.0
KX75202497.7036530.0
KX75198897.7036530.0
KX75197497.7036530.0
KX75197297.7036530.0
KX75197097.7036530.0
KX75196997.7036530.0
KX75196697.7036530.0
MK33072797.2776610.0
MK33072397.2776610.0
MK33071397.2776610.0
MF54756497.2776610.0
MF54754997.2776610.0
MG38572597.556530.0
MG38571597.556530.0
KY44933297.556530.0
KX75204897.556530.0
KX75204797.556530.0
KX75203897.6926500.0
KX75203797.556530.0
KX75203497.556530.0
KX75203297.556530.0
KX75202597.556530.0
KX75201897.556530.0
KX75197697.556530.0
KX75197397.556530.0
KX75196897.556530.0
KX75196497.556530.0
KX75196397.556530.0
KX75196197.556530.0
MF54756897.1266610.0
MF54756697.1266610.0
MF54756597.1266610.0
MG38572497.3976530.0
MG38572397.3976530.0
MG38572297.3976530.0
MG38571697.3976530.0
KX75204497.3976530.0
KX75204197.3976530.0
KX75203197.3976530.0
KX75202397.3976530.0
KX75202297.3976530.0
KX75202197.3976530.0
KX75202097.3976530.0
KX75201997.3976530.0
KX75201497.3976530.0
KX75198297.3976530.0
KX75197997.3976530.0
KX75197897.3976530.0
KX75197597.3976530.0
KX75196597.3976530.0
KX75196297.3976530.0
MF54756796.9746610.0
MG38571797.2436530.0
KX75204297.2436530.0
KX75204097.2436530.0
KX75203997.2436530.0
KX75203097.2436530.0
KX75201597.2436530.0
KX75201297.2436530.0
KX75201197.2436530.0
KX75200297.2436530.0
KX75198797.2436530.0
KX75198697.2436530.0
KX75198497.2436530.0
KX75198397.2436530.0
KX75198197.2436530.0
KX75198097.2436530.0
KX75197797.2436530.0
KX75197197.2436530.0
KX75196797.2436530.0
KX75204697.096530.0
KX75204597.096530.0
KX75204397.096530.0
KX75201797.096530.0
KX75201697.096530.0
KX75201097.096530.0
KX75200197.096530.0
KX75199497.096530.0
KX75198597.096530.0
KX75201396.9376530.0
KX75200996.9376530.0
KX75200496.9376530.0
KX75199996.9376530.0
KX75199896.9376530.0
KX75199696.9376530.0
KX75199296.9376530.0
KX75200896.7846530.0
KX75200796.7846530.0
KX75200596.7846530.0
KX75200396.7846530.0
KX75200096.7846530.0
KX75199796.7846530.0
KX75199596.7846530.0
KX75199396.7846530.0
KX75199096.7846530.0
KX75200696.6316530.0
KX75199196.6316530.0
KX75198996.6316530.0