Data Related Infomation

Camellia sinensis var. sinensis cv. Shuchazao                  CSS0023458.1                   AHAU CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   CSS0023458.1

KEGG Orthology

No KEGG Orthology Found

Gene Family

Chalcone

Gene Attributes

Chromosome:Chr7
Cds Coordinates:108672758-108673988
Nucleotide length:1230
Prodicted protein length:140

Gene Ontology Classification

Database Annotation Match Start Match End GO
PANTHERCHALCONE--FLAVONONE ISOMERASE 1-RELATED6137GO:0009813|GO:0045430
SUPERFAMILYChalcone isomerase6135GO:0016872
PfamChalcone-flavanone isomerase6133GO:0016872

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR016088Gene3D3110Chalcone isomerase, 3-layer sandwich
IPR044164PANTHER6137Chalcone--flavonone isomerase
IPR036298SUPERFAMILY6135Chalcone isomerase superfamily
IPR016087Pfam6133Chalcone isomerase
IPR016089Gene3D111136Chalcone isomerase, orthogonal bundle domain superfamily

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_02826381599.2524010.0
HQ26980596.4823980.0
XM_02823641995.4773983.44e-178
KY61568495.4773983.44e-178
DQ12052195.2263981.60e-176
XM_02826381698.6552236.35e-106
XM_0282638161001201.14e-53