Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0024461.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | Peptidase S10--serine carboxypeptidase |
| Locus Name: | CSS0024461.1 |
Gene Family
Peptidase_S10
Gene Attributes
| Chromosome: | Chr4 |
| Cds Coordinates: | 82042494-82049975 |
| Nucleotide length: | 7481 |
| Prodicted protein length: | 471 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 15 | 470 | GO:0004185|GO:0006508 |
| PRINTS | Carboxypeptidase C serine protease (S10) family signature | 130 | 140 | GO:0004185|GO:0006508 |
| PRINTS | Carboxypeptidase C serine protease (S10) family signature | 117 | 129 | GO:0004185|GO:0006508 |
| PRINTS | Carboxypeptidase C serine protease (S10) family signature | 165 | 190 | GO:0004185|GO:0006508 |
| PRINTS | Carboxypeptidase C serine protease (S10) family signature | 438 | 451 | GO:0004185|GO:0006508 |
| Pfam | Serine carboxypeptidase | 36 | 466 | GO:0004185|GO:0006508 |
Signal Peptide
SP(Sec/SPI)
CS pos:28-29.
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00450.23 | 12 | 471 | Peptidase S10--serine carboxypeptidase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001563 | PANTHER | 15 | 470 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 130 | 140 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 117 | 129 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 165 | 190 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 438 | 451 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | Pfam | 36 | 466 | Peptidase S10, serine carboxypeptidase |
| IPR029058 | SUPERFAMILY | 32 | 468 | Alpha/Beta hydrolase fold |
| IPR029058 | Gene3D | 26 | 298 | Alpha/Beta hydrolase fold |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028228453 | 96.469 | 1416 | 0.0 |
| XM_028228452 | 96.469 | 1416 | 0.0 |
| XM_028228454 | 96.565 | 1339 | 0.0 |
| XM_028223684 | 99.725 | 363 | 0.0 |
| XM_028215382 | 100 | 294 | 7.63e-150 |
| XM_028215390 | 97.619 | 294 | 3.60e-138 |