Data Related Infomation

Camellia sinensis var. sinensis cv. Shuchazao                  CSS0025990.1                   AHAU CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   CSS0025990.1

KEGG Orthology

K00660   

Gene Family

Chal_sti_synt_C,Chal_sti_synt_N

Gene Attributes

Chromosome:Chr5
Cds Coordinates:148073600-148074104
Nucleotide length:504
Prodicted protein length:119

Gene Ontology Classification

Database Annotation Match Start Match End GO
SUPERFAMILYThiolase-like46117GO:0016746
Gene3D-27118GO:0016746
SUPERFAMILYThiolase-like155GO:0016746
PANTHERHYDROXYMETHYLGLUTARYL-COA SYNTHASE28118GO:0009058|GO:0016747
PANTHERHYDROXYMETHYLGLUTARYL-COA SYNTHASE129GO:0009058|GO:0016747

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR001099Pfam128Chalcone/stilbene synthase, N-terminal
IPR016039SUPERFAMILY46117Thiolase-like
IPR012328Pfam55118Chalcone/stilbene synthase, C-terminal
IPR016039Gene3D27118Thiolase-like
IPR016039SUPERFAMILY155Thiolase-like
IPR011141PANTHER28118Polyketide synthase, type III
IPR011141PANTHER129Polyketide synthase, type III

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
GU72249795.8331921.99e-80
GU722497100795.94e-31
GU72249795.556907.68e-30
GU72248995.3121929.26e-79
GU722489100795.94e-31
KY61568296.203795.98e-26
GU72246998.734792.76e-29
GU72246598.734792.76e-29
GU722492100795.94e-31
GU72248397.468791.29e-27
GU72246097.468791.29e-27
GU72245997.468791.29e-27
D2659496.203795.98e-26
MG72080798.734792.76e-29
MG720805100795.94e-31
MG72080398.734792.76e-29
MG720802100795.94e-31
MG720792100795.94e-31
GU72251397.468791.29e-27
GU72251098.734792.76e-29
GU722458100795.94e-31
GU72250498.734792.76e-29
GU722503100795.94e-31
GU72250296.203795.98e-26
GU72250198.734792.76e-29
GU72249997.468791.29e-27
GU722498100795.94e-31
GU72249698.734792.76e-29
GU72249198.734792.76e-29
GU72249097.468791.29e-27
GU72248898.734792.76e-29
GU72247298.734792.76e-29
GU72248096.203795.98e-26
GU722467100795.94e-31
GU72247898.734792.76e-29
GU72247798.734792.76e-29
GU72247696.203795.98e-26
GU72247498.734792.76e-29
GU72247398.734792.76e-29
GU72247096.203795.98e-26
GU72246696.203795.98e-26
GU722464100795.94e-31
GU722463100795.94e-31
GU722462100795.94e-31
GU72246198.734792.76e-29
GU722456100795.94e-31
GU722453100795.94e-31
AY146708100795.94e-31
MG720806100795.94e-31
JN94457497.468791.29e-27
HQ70470197.468791.29e-27
GU72251298.734792.76e-29
GU72251197.468791.29e-27
GU72250897.468791.29e-27
GU722507100795.94e-31
GU722505100795.94e-31
GU72249598.734792.76e-29
GU72249498.734792.76e-29
GU722493100795.94e-31
GU722486100795.94e-31
GU72248498.734792.76e-29
GU72248298.734792.76e-29
GU72248198.734792.76e-29
GU72247598.734792.76e-29
GU722468100795.94e-31
GU722457100795.94e-31
GU72245297.468791.29e-27
GU722450100795.94e-31
GU72244998.734792.76e-29
GU722471100795.94e-31
GU72245597.468791.29e-27
GU72245497.468791.29e-27
GU72244898.734792.76e-29
GU72248597.468791.29e-27
AY14670497.468791.29e-27