Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0026524.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0026524.1 |
KEGG Orthology
Gene Family
No Gene Family Found
Gene Attributes
| Chromosome: | Chr1 |
| Cds Coordinates: | 153861860-153862423 |
| Nucleotide length: | 563 |
| Prodicted protein length: |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Glutamine synthetase/guanido kinase | 71 | 174 | GO:0003824 |
| Gene3D | Glutamine synthetase | 16 | 69 | GO:0004356|GO:0006542|GO:0006807 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR014746 | SUPERFAMILY | 71 | 174 | Glutamine synthetase/guanido kinase, catalytic domain |
| IPR036651 | Gene3D | 16 | 69 | Glutamine synthetase, N-terminal domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028250814 | 100 | 564 | 0.0 |
| XM_028204810 | 100 | 564 | 0.0 |
| MG778703 | 99.099 | 333 | 6.15e-167 |
| MG778703 | 98.469 | 196 | 8.85e-91 |
| XM_028270852 | 98.799 | 333 | 2.86e-165 |
| XM_028270852 | 98.469 | 196 | 8.85e-91 |
| KY649469 | 98.799 | 333 | 2.86e-165 |
| KY649469 | 98.469 | 196 | 8.85e-91 |
| JN226569 | 98.799 | 333 | 2.86e-165 |
| JN226569 | 98.469 | 196 | 8.85e-91 |
| AB115183 | 98.799 | 333 | 2.86e-165 |
| AB115183 | 98.469 | 196 | 8.85e-91 |
| JQ925873 | 98.498 | 333 | 1.33e-163 |
| JQ925873 | 97.959 | 196 | 4.12e-89 |
| JN602373 | 98.366 | 306 | 1.36e-148 |
| JN602373 | 97.101 | 138 | 7.19e-57 |
| AB085606 | 98.519 | 270 | 3.01e-130 |
| XM_028212849 | 95.918 | 196 | 1.93e-82 |
| XM_028212849 | 100 | 43 | 9.91e-11 |
| KF728397 | 100 | 67 | 4.51e-24 |