Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0026943.2 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0026943.2 |
KEGG Orthology
Gene Family
Epimerase,3Beta_HSD,GDP_Man_Dehyd,NAD_binding_10,NAD_binding_4,NmrA,Polysacc_synt_2,KR,adh_short
Gene Attributes
| Chromosome: | Chr11 |
| Cds Coordinates: | 73244114-73247558 |
| Nucleotide length: | 3444 |
| Prodicted protein length: | 329 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 14 | 254 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 14 | 254 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 10 | 322 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028256593 | 99.899 | 990 | 0.0 |
| XR_003646172 | 99.899 | 990 | 0.0 |
| FJ883579 | 98.89 | 991 | 0.0 |
| XM_028260815 | 99.718 | 710 | 0.0 |
| XM_028246621 | 99.649 | 570 | 0.0 |