Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0029211.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | No Gene Product Found |
Locus Name: | CSS0029211.1 |
Gene Family
2OG-FeII_Oxy,DIOX_N
Gene Attributes
Chromosome: | Chr12 |
Cds Coordinates: | 144150965-144154281 |
Nucleotide length: | 3316 |
Prodicted protein length: | 355 |
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
Pfam | 2OG-Fe(II) oxygenase superfamily | 214 | 310 | GO:0016491 |
ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 211 | 310 | GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Name | Match Start | Match End | E-value |
---|---|---|---|---|
Null | Null | Null | Null | Null |
Interpro hits
Interpro Accession | Name | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR005123 | Pfam | 214 | 310 | Oxoglutarate/iron-dependent dioxygenase |
IPR005123 | ProSiteProfiles | 211 | 310 | Oxoglutarate/iron-dependent dioxygenase |
IPR026992 | Pfam | 50 | 163 | Non-haem dioxygenase N-terminal domain |
IPR027443 | Gene3D | 4 | 353 | Isopenicillin N synthase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
XM_028231520 | 100 | 1068 | 0.0 |
MN266485 | 99.906 | 1068 | 0.0 |
AY830416 | 99.251 | 1068 | 0.0 |
KY615703 | 99.249 | 1065 | 0.0 |
KT215319 | 99.784 | 924 | 0.0 |