Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0031390.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0031390.1 |
KEGG Orthology
K15663 K21792 K16126 K15394 K15662 K15664 K16122 K15655 K15018 K13611 K15395 K16416 K12444 K18000 K16375 K15659 K12239 K01904 K22148 K16098 K16119 K02364 K16120 K16378 K15660 K19102 K12237 K22118 K01043 K16430 K03822 K16093 K16130 K04792 K12709 K16131 K14469 K16129 K10526 K01904 K01897 K16229 K12743 K16123 K15665 K12701 K15653 K12421 K16095 K16094 K04784 K15666 K04788 K15656 K15661 K15654 K15658 K16124 K12240 K22739 K15668 K15675 K16099 K16391 K24101 K21059 K16228 K00666 K04789 K15667 K04780 K15670 K18661 K16432 K23667 K12442 K15384 K16428 K00155 K16121 K19103 K12425 K22152 K23665
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | Chr6 |
| Cds Coordinates: | 4734242-4745506 |
| Nucleotide length: | 11264 |
| Prodicted protein length: | 537 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR000873 | Pfam | 29 | 432 | AMP-dependent synthetase/ligase |
| IPR042099 | Gene3D | 7 | 427 | AMP-dependent synthetase-like superfamily |
| IPR020845 | ProSitePatterns | 176 | 187 | AMP-binding, conserved site |
| IPR025110 | Pfam | 442 | 516 | AMP-binding enzyme, C-terminal domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028237569 | 99.612 | 1545 | 0.0 |
| XM_028237569 | 98.529 | 68 | 6.26e-22 |