Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0032602.3 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0032602.3 |
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | Chr1 |
| Cds Coordinates: | 36766285-36775780 |
| Nucleotide length: | 9495 |
| Prodicted protein length: | 365 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 3 | 359 | GO:0008168 |
| Pfam | SAM dependent carboxyl methyltransferase | 51 | 362 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR005299 | PANTHER | 3 | 359 | SAM dependent carboxyl methyltransferase |
| IPR005299 | Pfam | 51 | 362 | SAM dependent carboxyl methyltransferase |
| IPR029063 | SUPERFAMILY | 4 | 362 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR042086 | Gene3D | 8 | 346 | Methyltransferase, alpha-helical capping domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| AY907710 | 99.454 | 1098 | 0.0 |
| AB031281 | 99.362 | 1098 | 0.0 |
| XM_028205684 | 98.998 | 1098 | 0.0 |
| AB207816 | 98.723 | 1096 | 0.0 |
| AB207818 | 98.452 | 1098 | 0.0 |
| XM_028226209 | 95.264 | 1098 | 0.0 |
| XM_028205701 | 96.515 | 1033 | 0.0 |
| XM_028256069 | 96.104 | 77 | 2.52e-24 |
| XM_028205740 | 95.469 | 927 | 0.0 |
| XM_028211977 | 96.341 | 492 | 0.0 |
| HM003356 | 100 | 414 | 0.0 |
| JX647691 | 97.821 | 413 | 0.0 |
| JX647691 | 99.429 | 350 | 9.41e-178 |
| JX647691 | 100 | 276 | 5.95e-140 |
| JX647691 | 100 | 78 | 6.95e-30 |
| FJ554589 | 98.67 | 376 | 0.0 |
| XM_028268989 | 98.907 | 366 | 0.0 |
| JX647695 | 96.552 | 348 | 5.79e-160 |
| JX647695 | 96.739 | 276 | 6.08e-125 |
| JX647693 | 96.104 | 77 | 2.52e-24 |
| EF526217 | 96.377 | 276 | 2.83e-123 |
| JX647690 | 96.377 | 276 | 2.83e-123 |
| XM_028268333 | 95.205 | 146 | 5.19e-56 |
| XM_028268334 | 95.146 | 103 | 1.92e-35 |
| XM_028268332 | 95.146 | 103 | 1.92e-35 |
| XM_028268331 | 95.146 | 103 | 1.92e-35 |