Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0033346.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0033346.1 |
Gene Family
Epimerase,3Beta_HSD,NAD_binding_10,NAD_binding_4,GDP_Man_Dehyd,NmrA,Polysacc_synt_2
Gene Attributes
| Chromosome: | Chr4 |
| Cds Coordinates: | 12300637-12306167 |
| Nucleotide length: | 5530 |
| Prodicted protein length: | 339 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 13 | 255 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036291 | SUPERFAMILY | 9 | 318 | NAD(P)-binding domain superfamily |
| IPR001509 | Pfam | 13 | 255 | NAD-dependent epimerase/dehydratase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028243764 | 99.902 | 1020 | 0.0 |
| KY615693 | 99.607 | 1017 | 0.0 |