Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0035688.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0035688.1 |
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | Chr2 |
| Cds Coordinates: | 42022502-42028712 |
| Nucleotide length: | 6210 |
| Prodicted protein length: | 367 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 1 | 366 | GO:0008168 |
| Pfam | SAM dependent carboxyl methyltransferase | 39 | 366 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR005299 | PANTHER | 1 | 366 | SAM dependent carboxyl methyltransferase |
| IPR029063 | SUPERFAMILY | 1 | 366 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR005299 | Pfam | 39 | 366 | SAM dependent carboxyl methyltransferase |
| IPR042086 | Gene3D | 6 | 351 | Methyltransferase, alpha-helical capping domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028203811 | 100 | 1104 | 0.0 |
| KU892087 | 99.819 | 1104 | 0.0 |
| MG459470 | 99.728 | 1104 | 0.0 |
| JX909352 | 98.46 | 1104 | 0.0 |
| XM_028241618 | 99.806 | 1032 | 0.0 |
| XM_028249931 | 100 | 545 | 0.0 |
| MG459471 | 100 | 411 | 0.0 |
| MG459471 | 100 | 368 | 0.0 |
| MG459471 | 99.237 | 262 | 7.85e-129 |
| MG459471 | 100 | 75 | 3.25e-28 |