Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0043782.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | Peptidase S10--serine carboxypeptidase |
| Locus Name: | CSS0043782.1 |
Gene Family
Peptidase_S10
Gene Attributes
| Chromosome: | Chr9 |
| Cds Coordinates: | 110773962-110816825 |
| Nucleotide length: | 42863 |
| Prodicted protein length: | 443 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Serine carboxypeptidase | 31 | 440 | GO:0004185|GO:0006508 |
| PRINTS | Carboxypeptidase C serine protease (S10) family signature | 160 | 185 | GO:0004185|GO:0006508 |
| PRINTS | Carboxypeptidase C serine protease (S10) family signature | 410 | 423 | GO:0004185|GO:0006508 |
| PRINTS | Carboxypeptidase C serine protease (S10) family signature | 125 | 135 | GO:0004185|GO:0006508 |
| PRINTS | Carboxypeptidase C serine protease (S10) family signature | 112 | 124 | GO:0004185|GO:0006508 |
| PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 16 | 441 | GO:0004185|GO:0006508 |
Signal Peptide
SP(Sec/SPI)
CS pos:23-24.
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00450.23 | 1 | 443 | Peptidase S10--serine carboxypeptidase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR029058 | SUPERFAMILY | 27 | 442 | Alpha/Beta hydrolase fold |
| IPR001563 | Pfam | 31 | 440 | Peptidase S10, serine carboxypeptidase |
| IPR029058 | Gene3D | 22 | 293 | Alpha/Beta hydrolase fold |
| IPR001563 | PRINTS | 160 | 185 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 410 | 423 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 125 | 135 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 112 | 124 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PANTHER | 16 | 441 | Peptidase S10, serine carboxypeptidase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028196362 | 99.889 | 897 | 0.0 |
| XM_028196362 | 99.541 | 436 | 0.0 |
| XM_028196366 | 98.246 | 912 | 0.0 |
| XM_028196366 | 100 | 193 | 1.00e-93 |
| XM_028196366 | 95.745 | 47 | 3.14e-09 |
| XM_028196365 | 98.246 | 912 | 0.0 |
| XM_028196365 | 100 | 193 | 1.00e-93 |
| XM_028196365 | 98.473 | 131 | 6.33e-56 |
| XR_003627283 | 98.246 | 912 | 0.0 |
| XR_003627283 | 99.432 | 352 | 8.88e-179 |
| XM_028196363 | 98.246 | 912 | 0.0 |
| XM_028196363 | 99.432 | 352 | 8.88e-179 |
| XM_028196361 | 98.246 | 912 | 0.0 |
| XM_028196361 | 99.541 | 436 | 0.0 |
| XM_028196364 | 97.817 | 733 | 0.0 |
| XM_028196364 | 99.541 | 436 | 0.0 |
| XM_028196364 | 98.058 | 103 | 8.37e-40 |
| XM_028196369 | 99.838 | 618 | 0.0 |
| XM_028196369 | 99.541 | 436 | 0.0 |
| XM_028196369 | 99 | 100 | 8.37e-40 |
| XM_028196367 | 99.49 | 588 | 0.0 |
| XM_028196367 | 99.541 | 436 | 0.0 |
| XM_028196367 | 99 | 100 | 8.37e-40 |
| XM_028196367 | 100 | 39 | 4.06e-08 |
| XM_028204561 | 96.296 | 621 | 0.0 |
| XM_028213226 | 95.469 | 618 | 0.0 |
| XR_003629603 | 96.721 | 122 | 1.38e-47 |