Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0045074.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0045074.1 |
KEGG Orthology
Gene Family
Chal_sti_synt_C
Gene Attributes
| Chromosome: | Chr5 |
| Cds Coordinates: | 148056652-148060455 |
| Nucleotide length: | 3803 |
| Prodicted protein length: | 70 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Gene3D | - | 17 | 67 | GO:0016746 |
| SUPERFAMILY | Thiolase-like | 19 | 66 | GO:0016746 |
| PANTHER | HYDROXYMETHYLGLUTARYL-COA SYNTHASE | 19 | 43 | GO:0009058|GO:0016747 |
| PANTHER | HYDROXYMETHYLGLUTARYL-COA SYNTHASE | 43 | 68 | GO:0009058|GO:0016747 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR012328 | Pfam | 44 | 68 | Chalcone/stilbene synthase, C-terminal |
| IPR016039 | Gene3D | 17 | 67 | Thiolase-like |
| IPR016039 | SUPERFAMILY | 19 | 66 | Thiolase-like |
| IPR011141 | PANTHER | 19 | 43 | Polyketide synthase, type III |
| IPR011141 | PANTHER | 43 | 68 | Polyketide synthase, type III |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| Null | Null | Null | Null |