Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0046296.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0046296.1 |
KEGG Orthology
K15665 K23667 K12444 K16099 K12701 K15668 K16416 K16391 K16120 K16122 K15663 K16428 K15384 K22148 K04792 K16378 K22739 K23665 K16131 K15659 K16095 K15675 K12425 K02364 K19102 K19103 K16432 K16126 K16121 K12442 K16430 K21792 K16123 K12421 K03822 K01904 K14469 K10526 K01904 K01897 K22152 K00155 K15018 K21059 K15653 K15394 K15666 K13611 K15662 K04789 K16124 K16375 K04788 K15655 K15656 K12239 K15395 K15660 K16129 K12709 K18000 K16119 K15664 K12743 K16094 K24101 K00666 K15661 K15654 K15667 K04780 K15670 K12237 K16130 K15658 K04784 K22118 K12240 K16229 K16098 K16228 K16093 K01043
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | Chr6 |
| Cds Coordinates: | 4916710-4927969 |
| Nucleotide length: | 11259 |
| Prodicted protein length: | 530 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR000873 | Pfam | 29 | 420 | AMP-dependent synthetase/ligase |
| IPR020845 | ProSitePatterns | 176 | 187 | AMP-binding, conserved site |
| IPR042099 | Gene3D | 7 | 414 | AMP-dependent synthetase-like superfamily |
| IPR025110 | Pfam | 430 | 504 | AMP-binding enzyme, C-terminal domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028237569 | 99.876 | 807 | 0.0 |
| XM_028237569 | 99.445 | 721 | 0.0 |
| XM_028237569 | 98.529 | 68 | 6.18e-22 |