Data Related Infomation

Camellia sinensis var. sinensis cv. Shuchazao                  CSS0048281.1                   AHAU CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   CSS0048281.1

KEGG Orthology

K10775  K13064  K01745  K20709  K13064   

Gene Family

Lyase_aromatic

Gene Attributes

Chromosome:Chr11
Cds Coordinates:54475057-54478145
Nucleotide length:3088
Prodicted protein length:703

Gene Ontology Classification

Database Annotation Match Start Match End GO
SUPERFAMILYL-aspartase-like12703GO:0003824
TIGRFAMphe_am_lyase: phenylalanine ammonia-lyase12693GO:0005737|GO:0006559|GO:0016841
ProSitePatternsPhenylalanine and histidine ammonia-lyases signature.185201GO:0016841

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR023144Gene3D516630Phenylalanine ammonia-lyase, shielding domain superfamily
IPR008948SUPERFAMILY12703L-Aspartase-like
IPR005922TIGRFAM12693Phenylalanine ammonia-lyase
IPR022313ProSitePatterns185201Phenylalanine/histidine ammonia-lyases, active site
IPR001106PANTHER5703Aromatic amino acid lyase
IPR001106Pfam50525Aromatic amino acid lyase
IPR024083Gene3D11249Fumarase/histidase, N-terminal
IPR001106CDD68513Aromatic amino acid lyase

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_02821481999.81121120.0
MN20717499.62121120.0
KY61567399.33721110.0