Data Related Infomation
Camellia sinensis var. sinensis cv. Shuchazao CSS0049932.1 AHAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSS0049932.1 |
Gene Family
Epimerase,3Beta_HSD,NAD_binding_10,GDP_Man_Dehyd,NAD_binding_4,NmrA
Gene Attributes
| Chromosome: | Chr11 |
| Cds Coordinates: | 17035779-17040172 |
| Nucleotide length: | 4393 |
| Prodicted protein length: | 171 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 8 | 132 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 8 | 132 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 3 | 160 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028245728 | 99.174 | 484 | 0.0 |
| XM_028245726 | 97.314 | 484 | 0.0 |
| XM_028245727 | 100 | 288 | 5.75e-147 |