Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR000025 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR000025 |
KEGG Orthology
Gene Family
2OG-FeII_Oxy
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 854652-854948 |
| Nucleotide length: | 296 |
| Prodicted protein length: | 98 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | 2OG-Fe(II) oxygenase superfamily | 28 | 95 | GO:0016491 |
| ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 26 | 98 | GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR005123 | Pfam | 28 | 95 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | ProSiteProfiles | 26 | 98 | Oxoglutarate/iron-dependent dioxygenase |
| IPR027443 | Gene3D | 1 | 98 | Isopenicillin N synthase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615689 | 96.043 | 278 | 3.26e-122 |
| XM_028250542 | 95.683 | 278 | 1.52e-120 |
| AB524884 | 95.324 | 278 | 7.06e-119 |