Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR000026 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR000026 |
KEGG Orthology
Gene Family
2OG-FeII_Oxy
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 855317-855724 |
| Nucleotide length: | 407 |
| Prodicted protein length: | 135 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | 2OG-Fe(II) oxygenase superfamily | 66 | 132 | GO:0016491 |
| ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 61 | 135 | GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027443 | Gene3D | 4 | 135 | Isopenicillin N synthase-like |
| IPR005123 | Pfam | 66 | 132 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | ProSiteProfiles | 61 | 135 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028200856 | 98.039 | 408 | 0.0 |
| KY615689 | 97.175 | 354 | 4.34e-167 |
| XM_028250542 | 96.893 | 354 | 2.02e-165 |
| AB524884 | 96.893 | 354 | 2.02e-165 |